Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKVGLMGVMADTVIANGGYTTGVIPTFLRDREIAHENLSELIIVNNMPERKAKMMLLGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY
3QUA Chain:B ((25-189))
--VCVYC-ASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKALVHRELADVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACAPE--------
General information:
TITO was launched using:
RESULT:
Template:
3QUA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112722 for 1336 contacts (-84.4/contact) +
2D Compatibility (PS) -18774 + (NN) -10905 + (LL) 912
1D Compatibility (HY) -9600 + (ID) 3050
Total energy: -154139.0 ( -115.37 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3QUA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUA-query.scw
PDB file :
Tito_Scwrl_3QUA.pdb
: