Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRNPFKDKYYSHDRRALNMLALRVPGLAFILMIYIASIVLQFVSGGWSILLLYAFTILIAIFALLHWHSYRWVKKRVILYFAVQGLITFALANLMTGFFILVIIGLYAFLIGQIIGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHFIVIAAPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRVKSTIADARSAIDDLRSKSEEIGVLKERITSLMDHFIESTGMACLLDYRLH-QVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISIWDDEKGRLHLTVKDNGKGFDVEKGKKKRGHYGLLGIQERVRAINGQFNIKSTKLKGTQIEITVPIQGEMQDE
3EHG Chain:A ((1-125))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWK-EVVITVSDDGTFKG--EENSFSKGHGLLGMRERLEFANGSLHIDTEN--GTKLTMAIPN-------


General information:
TITO was launched using:
RESULT:

Template: 3EHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 573 -73672 -128.57 -594.13
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -128.57
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_3EHG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EHG-query.scw
PDB file : Tito_Scwrl_3EHG.pdb: