Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDAGLLLIRIMIGVVFLFYGTQKLFGWFGGYGIKGTG-QWFESIGVKPGNVAAALSGLGELVSGILF------ILGVFLPLGAAIITIIMLGAIVKVHGAKGFANGAGGFEYNLVLIAVSIGVALIGSGAYALHF
2HFI Chain:A ((1-123))MLSQ-----TLLEMTEQMIEVAEKGADRYQEGKNSNHSYDFFETIKPAVEENDELAARWAEGALELIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKKRFKDITESVLYTLHAVKDEIARE--DSR------


General information:
TITO was launched using:
RESULT:

Template: 2HFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 352 -66668 -189.40 -574.72
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -189.40
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.196

(partial model without unconserved sides chains):
PDB file : Tito_2HFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HFI-query.scw
PDB file : Tito_Scwrl_2HFI.pdb: