Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAEFLVGRSGSGKTKLIINSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGMIRAQVFSFSRLAWRVLQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFTAQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSEKLHDLSILYQQMEKSLAD-QYLHSEDYLTLLAEHIPLAE-----------DIKGAHIYVDGFYQFTPQEFRVLEQLMVHA-EHITFSLTADKPSYEREPHELELFRMTGKTYYRLHQKAKELN----LDITYKELSGTE-RHTKTPELAHLEAQYEARPAIP------Y------------AE-KQEALTVM---QAANRRAELEGIAREIHALVRE---------KGYRYKDVAILARQPEDYKDMVKEVFADYEIPYFIDGKASMLNHPLIEFIRSSLDVLKGNWRYEAVFRCVKTELLFPLNEPKAKVREQVDQLENYCIAYGIKGDRWTKGDRFQYRRFVSLDDDFAQTDQEIEMENMLNDTRDWIVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLKLDQERQRAEDDGRIIEAQQHQQAWDAVIQLLEEFVEMMGDDEISLDLFQQMIEAGAESL-TFSLIPPALDQVFVGNMDLSRMYGTSCTFVLGANDGVLPARPDENGVLSDDDREW-----------LKTI--GVELSSGGRERLLDEHFLIYMAFSSPSDRLYVSYPIADAEGK-------------------TLLPSMIVKRLEELFPHHKERLLTNEPEQVSDEEQLMYVVNKS-VA-QSFTA--SQLRLWTREYDISDVWWSTYNVLMS-E-QDRLQSKKLFSSLFFRNEVKQLERSVSRQLYGERIQGSVSRMETFNACPFSHFASHGLHLKERQ--------FFKLEAPDIGQLFHSSLKLISDRLREQKLDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSNRHYYVKEKLQKIVTRVSGILSEHAKASGFVPIGLELGFGGKGPLPPLTF--Q-LKNGCTMELVGRIDRVDKAESSKGLLLRIVDYKSSDKGLDL------AEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFHIHDPMIQSNLPLGLDEIEQEIFKKFKMKGLLLGDQEVVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAVGEKEFDLLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTPCTYCAFKSVCQFDESLEENEYRPLKAEKDKTILEWIKKEADGNEHS
3U4Q Chain:A ((349-1227))--------------------------------------------------------------------------------------------------------------------------------------------------------------------VISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDREPSEAARFYQEQFHEVLVDEYQDTNLVQESILQLVTSGPEETGNLFMVGDVKQ--------SIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNK-NFRS--RADILDSTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLID-LETVQFEAKAIAKEIRKLISSPFKVYKKTHRNIQYRDIVILLRSM-PWAPQIMEELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIV--G-----ADENELSLIRLENKKA----PYYEA---MKDYLAAGDRS--------DELYQKLNTF----YGHLQKWR----AFSKNHSVSELIWEVYRDTKYMDYVGGM-------------PGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGD-------QEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQTDWLLPEFDRYQARTYLDFIGPALARHR----------------HADISGHPARFAVQMIHSYD--------------SERLEAIRRGEPV---FAFDEKAR--EQLSWTYPHQE-V-T---QIRTKQSVS---------DEYSGR---------YRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVP--------SIEEAEQTVHRLYEKEL-------LTEEQKDAIDIEEIVQFFH---TEIGGQL--IGAKWKDREIPFSLA--LPAKEIYPDAHEADEPLLVQGIIDCLYETE----DGLYLLAYKSDRIEG--GFEGAAPILKKRYETQIQLYTKAVEQIAKT------KVKGCALYFFDGG--------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3U4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2690 -270673 -100.62 -389.46
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -100.62
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_3U4Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U4Q-query.scw
PDB file : Tito_Scwrl_3U4Q.pdb: