Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVPKTMLLSTAAGLLLSLTATSVSAHYVNEEHHFKVTAHTETDPVASGDDAADDPAIWVHEKHPEKSKLITTNKKSGLVVYDLDGKQLHSYEFGKLNNVDLRYDFPLNGEKIDIAAASNRSEGKNTIEVYAIDGDKGKLKSITDPNHPISTNISEVYGFSLYHSQKTGAFYALVTGKQGEFEQYEIVDGGKGYVTGKKVREFKLN------SQTEGLVADDEYGNLYIAEED-EAIWKFNAEPGGGSKGQVVDRATG-D-------HLTADIEGLTIYYAPNGKGYLMASSQGNNSYAMYERQGKNRYVANFEITDGEKIDGTSDTDGIDVLGFGLGPKYPYGIFVAQDGENIDNGQAVNQNFKIVSWEQIAQHLGEMPDLHKQVNPRKLKDRSDG
2IWA Chain:A ((118-237))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILYGSDGTSILYEIDPHTF-------KLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLL--GWILLPNLRKKLIDEGFRDIDVLNGIAWD--QE-NKRIFVTGKLWPKLFEIKLHL--------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 407 5714 14.04 54.42
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 14.04
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_2IWA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IWA-query.scw
PDB file : Tito_Scwrl_2IWA.pdb: