Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGRL
2W2B Chain:B ((24-183))LDDFLGTHFIYTFDNGWEYEWYAKNDHTVDYRIHGGMVAGRWVTDQKADIVMLTEGIYKISWTEPTGTDVALDFMPNEKKLHGTIFFPKWVEEHPEITVTYQNEHIDLMEQSREKYATYPKLVVPEFANITYMGDAGQNNEDVISEAPYKEMPNDIRNGK-


General information:
TITO was launched using:
RESULT:

Template: 2W2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 772 -64780 -83.91 -404.87
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.95

3D Compatibility (PKB) : -83.91
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_2W2B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W2B-query.scw
PDB file : Tito_Scwrl_2W2B.pdb: