Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQWIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRSKMALIITKQ--EQAVKEAVLQKIDRGVTKISAVGG-YTD-----DDRPILMCVVGQTEFTKLKQIVKQIDE-----SAFVIVADASEVLGEGFKRA
1HWU Chain:A ((4-101))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTAIIKPFKLDEVRESLAEVGVTGLTVTEVKGFG---YVVDFLPKVKIEVVVDDKVVEQAVDAIIKAARTGKIGDGKIFVQEVEQVIR------


General information:
TITO was launched using:
RESULT:

Template: 1HWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 232 11435 49.29 158.82
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : 49.29
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_1HWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HWU-query.scw
PDB file : Tito_Scwrl_1HWU.pdb: