Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVDYEREEEHTTPEQPKRSKKGYFLSSLIGVIVGAVLMAFIMPYLSNEGLDTGALDQQQNNNGRESIRTVNVSVNNAVTKIVSNMSPAVVGVVNIQ-KSDIWGE---SGEAGSGSGVIYKKNDHSAYVVTNHHVIEGASQIEISLKDGSRVSADLVGSDQLMDLAVLRVKS--DKIKAVADFGNSDKVKSGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLNMDGKVIGINSMKIAES-AVEGIGLSIPSKLVIPVIEDLERYGKVKRPFLGIEMKSLSDIASYHWDETLKLPKNVTNGAVVMGVDAFSPAGKAGLKEL-----------DVITEFDGYKVNDIVDLRKRLYQKKVGDRVKVKFYRGGKEKSVDIKLSSADQLGS
3QO6 Chain:C ((18-330))----------------------------------------------------------------------------ATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGH---IVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIP-VGVSADLLVGQKVFAIGNPFGLDH--TLTTGVISGLRREI--SSAATGRP--IQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIK---------FAPDQSVE--QLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTL--------


General information:
TITO was launched using:
RESULT:

Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1581 51182 32.37 173.50
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.74

3D Compatibility (PKB) : 32.37
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3QO6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QO6-query.scw
PDB file : Tito_Scwrl_3QO6.pdb: