Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEWNEGVKGAWVLARYDDGR--PSQVRLDTAVQGIEGTYIHAVYYP-GENQIQTVMQQGELFAKQEQLFSVVATGAASLLTVDMDVQVTMPVPEPMVKMLLNNVLEHLAENLKQRAEQLAAS
1T17 Chain:A ((1-147))
---------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVRRDKDARSIDVSLLY-GPFKRLNNGWRFMPEGDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHG-
General information:
TITO was launched using:
RESULT:
Template:
1T17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45076 for 1010 contacts (-44.6/contact) +
2D Compatibility (PS) -15354 + (NN) -2690 + (LL) 636
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -68684.0 ( -68.00 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1T17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T17-query.scw
PDB file :
Tito_Scwrl_1T17.pdb
: