Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADVPLDAQERLELCDLLEELGPAVATLIEGWTAHDLAAHIVLRERDLVAGLCIVLPGPFQRFAERRRARLAQSKDFTWLVARIRSGPPMGFFRIGWVRTLANLNEFFVHHEDVRRASGRGPRSLTPEMDAALWRNVRRGSHFLSRRLHGCGLEIEWVGTGKRVRVRSGEPTARLTGPPGELLLYVFGRRAVA------RVEVSGPLEAIAAVHRTHFGM |
1PZ4 Chain:A ((64-110)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAAEATLTMEDDIMFAIGTGALPAKEAMAQDKMEVDGQVELIFLLEP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16684 for 206 contacts (-81.0/contact) +
2D Compatibility (PS) -4478 + (NN) -1094 + (LL) 12752
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -11954.0 ( -58.03 by residue)
QMean score : 0.443
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