Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLLDLDAPNGYTFKEDEYPST-AYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDF---HAFSAAPNFAFELAARRTTDDDMA-GRDLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYGLAEATVYVATSKPGQPPETVDFDTESLSAGH----------AKPCAGGGATSLISYMLPRSPIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVT-PSPGTPEGP-----WLRTGDSGFVTDGKMFIIGRIKDLLIVYGRNHSPDDIEATIQEITR----GRCAAISVPG-------------------DRSTEKLVAIIELKKRGDSDQDAMARLGAIKREVTSALSSSHGLSVADLVLVAPGSIPITTSGKVRRGACVEQYRQDQFARLDA |
5EY8 Chain:H ((20-611)) | ----SIVAHVERWAKVRGDK-AYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQPGDRVAILCPQNLDYLVAFFGALYAGRIAVPLFDPSE--HVGRLHAVLDNCHPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVDAVPDDVASTWVNPDEPDETTIAYLQYTSG--RIPTGVQITHLNLATNVVQVIEALEGEE------GDRGLSWLPFFHDMGLITALL--MIGHYFTFMT-PAAFVRRPERWIRELARKEGDT-TISVAPNFAFDHAAARGVPKPGSPPLDLSNVKAVLNGSEPISAATVRRFNEAFGPFGFPPKAIKPSYGLAEATLFVSTTPSAEEPKIITVDRDQLNSGRIVEVDADSPKAVAQASAGKVGIAEWAV-------IVDAESATELPDGQVGEIWISGQNMGTGYWGKPEESVATFQNILKSRTNPSHAEGATDDATWVRTGDYGAFYDGDLYITGRVKDLVIIDGRNHYPQDLEYSAQEASKAIRTGYVAAFSVPANQLPDEVFENAHSGIKRDPDDTSEQLVIVAE-RA--AHKLD----IGPITDDIRAAIAVRHGVTVRDVLLTAAGAIPRTSSGKIGRRACRAAY---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5EY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -293817 for 4610 contacts (-63.7/contact) +
2D Compatibility (PS) -58839 + (NN) -34088 + (LL) 1804
1D Compatibility (HY) -38400 + (ID) 11050
Total energy: -434390.0 ( -94.23 by residue)
QMean score : 0.465
|
|
|