Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
3NHZ Chain:D ((4-121))
---MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLR-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108715 for 962 contacts (-113.0/contact) +
2D Compatibility (PS) -13366 + (NN) -11523 + (LL) 7548
1D Compatibility (HY) -19200 + (ID) 5900
Total energy: -151156.0 ( -157.13 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_3NHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NHZ-query.scw
PDB file :
Tito_Scwrl_3NHZ.pdb
: