Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTVLGIETSCDETGVGIARLDPDGTVTLLADEVASSVDEHVRFGGVVPEIASRAHLEALGPAMRRALAAAG--LKQPDIVAATIGPGLAGALLVGVAAAKAYSAAWGVPFYAVNHLGGHLAADVYEHGPLPECVALLVSGGHTHLLHVRSLGEPIIELGSTVDDAAGEAYDKVARLLGLGYPGGKALDDLARTGDRDAIVFPRGMSGPADDRYAFSFSGLKTAVARYVESHAADPGFRTADIAAGFQEAVADVLTMKAVRAATALGVSTLLIAGGVAANSRLRELATQRCGEAGRTLRIPSPRLCTDNGAMIAAFAAQLVAAGAPPSPLDVPSDPGLPVMQGQVR |
2IVO Chain:D ((4-301)) | ----LGIEGTAHTLGIGIVSEDK-----VLANVFDTLTTEK---GGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHV--EITKMFGVKDPVGLYVSGGNTQVLALE--GGRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEK-YIELPYAVKG-----MDLSFSGLLTEAIRKYRSGK----YRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208070 for 2632 contacts (-79.1/contact) +
2D Compatibility (PS) -33173 + (NN) -21724 + (LL) 1272
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -284795.0 ( -108.20 by residue)
QMean score : 0.527
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