Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESLKPDESKRLSIEESDCVSAGFQCPEIHWQDFPTPNFDCSYSTSSQGR
2PQ4 Chain:B ((1-35))
-MKLSRRSFMKANAVAAAAAAAGLSVPGV--------------ARAVVGQ
General information:
TITO was launched using:
RESULT:
Template:
2PQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5389 for 157 contacts (34.3/contact) +
2D Compatibility (PS) -3732 + (NN) -2484 + (LL) 452
1D Compatibility (HY) 0 + (ID) 250
Total energy: -625.0 ( -3.98 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ4-query.scw
PDB file :
Tito_Scwrl_2PQ4.pdb
: