Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRD-LNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRT--LAVRVGTEALSVTASVGVTEHRI-GETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR
2V0N Chain:B ((260-452))
-----------------------LSARVKTQIQR--------KRYTDYLRNNLDHSL-ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAH------------
General information:
TITO was launched using:
RESULT:
Template:
2V0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75340 for 1350 contacts (-55.8/contact) +
2D Compatibility (PS) -20881 + (NN) -9949 + (LL) 2924
1D Compatibility (HY) -15600 + (ID) 3950
Total energy: -122796.0 ( -90.96 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2V0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V0N-query.scw
PDB file :
Tito_Scwrl_2V0N.pdb
: