Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
| 1ON9 Chain:F ((46-213)) | -----------------ARERLNNLLDPHSFDEVGAFRKHRTTLFGMDKAVVPA--DGVVTGRGTILGRPVHAASQDFTVMGGSAGETQSTKVVETMEQAL---LTGTPF--LFFYDSGGARIQEGIDSLSGYGKMFFANVKLSGVVPQIAIIAGP--CAGGASYSPALTDFIIMTKKAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFLPQNNTEEASFVNPNNDVSPNTELRDIVPIDGKKGYDVRDVIAKIVDWGDYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ON9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92074 for 1408 contacts (-65.4/contact) +
2D Compatibility (PS) -18960 + (NN) -9500 + (LL) 1936
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -128748.0 ( -91.44 by residue)
QMean score : 0.450
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