Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNT-PSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
3ZKC Chain:B ((2-63))
IGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLD----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29030 for 416 contacts (-69.8/contact) +
2D Compatibility (PS) -6852 + (NN) -5846 + (LL) 7512
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -41216.0 ( -99.08 by residue)
QMean score : 0.755
(partial model without unconserved sides chains):
PDB file :
Tito_3ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZKC-query.scw
PDB file :
Tito_Scwrl_3ZKC.pdb
: