Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILR---L-RP-----DTRVGEFAAVLEVGAEFGARYVLVAGND-----------DDERRSADNFAALCDLARPLGLDPHLEFMPWT---GIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGL-DLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
3KWS Chain:A ((23-286)) | DLELKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGGL------------AGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINNPGVRCMGDFWHMTWEETSDMGAFISGGEYLQHVHVASRKR---------------RSMPGEDGDADNYINGFKGLKMIGYNNYVSFECGCQG------DRNVVVPAAVKLLREQWEQA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -133149 for 2000 contacts (-66.6/contact) +
2D Compatibility (PS) -25956 + (NN) -8641 + (LL) 2556
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -168290.0 ( -84.14 by residue)
QMean score : 0.553
|
|
|