Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEPGHLHLVSLPGLDQQDINIHIRYEVRQNAESGAYVHFDMDGEIDGKPFSDSFELPRDTAFNFASDATRVAQKHGLHPKFGAITRVHKEYDAMFEDIRAKLHAHPGEPVDLERIIRHE
4O1P Chain:D ((332-379))
-----HLHRIWRPMIGKLKIFIDEEYKIADTAEGGIYLGLYEDQEVAVKRFSEGSTRGQQEVSCLQSSRANDNVVTFYGSESDGSCLHVCLALCEYTLQEHLANHRGDAVPNEEDESARN
General information:
TITO was launched using:
RESULT:
Template:
4O1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3692 for 268 contacts (-13.8/contact) +
2D Compatibility (PS) -4675 + (NN) 1622 + (LL) 132
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -10613.0 ( -39.60 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_4O1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O1P-query.scw
PDB file :
Tito_Scwrl_4O1P.pdb
: