Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
| 1Y66 Chain:A ((3-52)) | ---------------------------------------------------------------------------------QWSEEVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFFREFEQRK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4192 for 193 contacts (21.7/contact) +
2D Compatibility (PS) -5876 + (NN) -4532 + (LL) 9984
1D Compatibility (HY) 1200 + (ID) 400
Total energy: 4568.0 ( 23.67 by residue)
QMean score : 0.627
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