Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPGAEAWQPTTDLASAGAFLYPARPLNDWDEIMLENTLERLETLVAELLQQNQALRDSHDQLQQQLRQATEENETLQLSMLEQEEKQSGTQARLEALVERLSAQQPVSA
2JEE Chain:A ((3-75))
---------------------------------MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL----
General information:
TITO was launched using:
RESULT:
Template:
2JEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9956 for 295 contacts (33.7/contact) +
2D Compatibility (PS) -8527 + (NN) -7428 + (LL) 1864
1D Compatibility (HY) 400 + (ID) 750
Total energy: -4485.0 ( -15.20 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_2JEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEE-query.scw
PDB file :
Tito_Scwrl_2JEE.pdb
: