Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA
3WBG Chain:D ((21-152))
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKE-
General information:
TITO was launched using:
RESULT:
Template:
3WBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37444 for 924 contacts (-40.5/contact) +
2D Compatibility (PS) -14764 + (NN) -4129 + (LL) 144
1D Compatibility (HY) -18000 + (ID) 6600
Total energy: -80793.0 ( -87.44 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3WBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WBG-query.scw
PDB file :
Tito_Scwrl_3WBG.pdb
: