Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
1CBR Chain:B ((1-136))
-PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
General information:
TITO was launched using:
RESULT:
Template:
1CBR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39882 for 999 contacts (-39.9/contact) +
2D Compatibility (PS) -15419 + (NN) -9303 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 6800
Total energy: -88396.0 ( -88.48 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1CBR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBR-query.scw
PDB file :
Tito_Scwrl_1CBR.pdb
: