Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLKPWTA---SYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSDD-HGSEHSVDGVKYAAELHLVHWNS-KYNSYATALKHADGIAVVGVFLKIGREKGEFQLLLDALDKIKTKGKEAPFNNFNPSCLFPA-CRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQIAKLRTLYSS--AENEPPVPLVRNWRPPQPIKGRIVKASFK |
| 1JD0 Chain:A ((3-262)) | ---KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD-----MHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104105 for 2010 contacts (-51.8/contact) +
2D Compatibility (PS) -27081 + (NN) -14754 + (LL) 712
1D Compatibility (HY) -20400 + (ID) 4200
Total energy: -169828.0 ( -84.49 by residue)
QMean score : 0.511
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