Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGHHGWGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLEL---SYEACMSLSITNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHD-VGSEHTVDGKSFPSELHLVHWNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCLLPA-SRHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTS--EDDERIHMVNNFRPPQPLKGRVVKASFRA |
| 1JD0 Chain:A ((3-262)) | -----KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD-----MHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106041 for 2024 contacts (-52.4/contact) +
2D Compatibility (PS) -27203 + (NN) -12924 + (LL) 512
1D Compatibility (HY) -19600 + (ID) 5000
Total energy: -170256.0 ( -84.12 by residue)
QMean score : 0.511
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