Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHAGRTGYDNREIVMKYIHYKLSQRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGPSMRPLFDFSWLSLKTLLSLALVGACITLGAYLGHK
4MAN Chain:B ((8-163))
-------GYDNREIVMKYIHYKLSQRGYE-------------------------------------------------------------EVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGP-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107335 for 995 contacts (-107.9/contact) +
2D Compatibility (PS) -14431 + (NN) -3216 + (LL) 3972
1D Compatibility (HY) -21600 + (ID) 6750
Total energy: -149360.0 ( -150.11 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_4MAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MAN-query.scw
PDB file :
Tito_Scwrl_4MAN.pdb
: