Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4FYK Chain:B ((4-143))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLT-----------------GDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAY-------------
General information:
TITO was launched using:
RESULT:
Template:
4FYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88311 for 910 contacts (-97.0/contact) +
2D Compatibility (PS) -13713 + (NN) -9182 + (LL) 2056
1D Compatibility (HY) -18800 + (ID) 6100
Total energy: -134050.0 ( -147.31 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_4FYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FYK-query.scw
PDB file :
Tito_Scwrl_4FYK.pdb
: