Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPPGSNGTAYPGQFALYQQLAQGNAVGGSAGAPPLGPSQVVTACLLTLLIIWTLLGNVLVCAAIVRSRHLRANMTNVFIVSLAVSDLFVALLVMPWKAVAEVAGYWPFGAF-CDVWVAFDIMCSTASILNLCVISVDRYWAISRPFRYKRKMTQRMALVMVGLAWTLSILISFIPVQLNWHRDQAASWGGLDLPNNLANWTPWEEDFWEPDVNAENCDSSLNRTYAISSSLISFYIPVAIMIVTYTRIYRIAQVQIRRISSLERAAEHAQSCRSSAACAPDTSLRASIKKETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCSGHPEGPPAGFPCVSETTFDVFVWFGWANSSLNPVIYAFNADFQKVFAQLLGCSHFCSRTPVETVNISNELISYNQDIVFHKEIAAAYIHMMPNAVTPGNREVDNDEEEGPFDRMFQIYQTSPDGDPVAESVWELDCEGEISLDKITPFTPNGFH
4AMJ Chain:B ((17-300))---------------------------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQ-TLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDED--------PQAL-------KCYQDPGC----CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKI---DRASKRKTS-------------RVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF----------NRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233300 for 2106 contacts (-110.8/contact) +
2D Compatibility (PS) -28874 + (NN) -5940 + (LL) 7504
1D Compatibility (HY) -37200 + (ID) 6750
Total energy: -304560.0 ( -144.62 by residue)
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4AMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMJ-query.scw
PDB file : Tito_Scwrl_4AMJ.pdb: