Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNATPSEEPGFNLTLADLDWDASPGNDSLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSR--FRELRTTTNLYLSSMAFSDLLIF-LCMPLDLVR-LWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEH--ENGTDPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFL-PVFCLTVLYSLIGRKL----WRRRRGDAVVGASLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYLFSK-SFEPGSLEIAQISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFRLLGFEPFSQRKLSTLKDESSRAWTESSINT |
| 4BWB Chain:B ((22-316)) | ---------------------------------------------VTAIYLALFVVGTVGNGVTLFTLARKK-----SRVDYYLGSLALSDLLILLFALPVDLYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAICHP--AKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNLSGDGTHPGGL-VCTPI---VDTATLRVVIQLNTFMSFLFPMLVASILNTVAARRLTVMVHQAA--------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253519 for 1935 contacts (-131.0/contact) +
2D Compatibility (PS) -27029 + (NN) -10805 + (LL) 5308
1D Compatibility (HY) -30000 + (ID) 5400
Total energy: -321445.0 ( -166.12 by residue)
QMean score : 0.328
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