Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRR-KNTCQNFMEYFCISLAFVDLLLLV-NISIILYFRDFVLLSIRFTKYHICLFTQ---IISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAYSRHCPF-------YVS-IQSY---WLSFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETIL--------------------------------------------------------------------------------------------------------------------------------Y-FPF--------------SSHSSYTVRSKK--IFLSKLIVCFLSTWLPFVLLQVIIVLLKV--QIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 3EML Chain:A ((24-462)) | -----------------------YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS----TGFCA-ACHGCLFIACFVLVLTQSSIFSL---LAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLT-P-MLGWNNCGQ--SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269436 for 1891 contacts (-142.5/contact) +
2D Compatibility (PS) -26622 + (NN) -4479 + (LL) 3660
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -310677.0 ( -164.29 by residue)
QMean score : 0.243
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