Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYG-YVYIPALYLAAFAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTPRCALASCCGVWAVALLAGLPSLVYRGLQPLPGGQDSQC-GEEPS-HAFQG--LSLLLLLLTFVLPLVVTLFCYCRISRRLRRPPHVGRARRNSLRII----FAIESTFVGSWLPFSALRAVFHLAR-LGALPLPCPLLLALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTASASW |
| 4EA3 Chain:B ((116-402)) | ----------------------------------LPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLP-FQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA-------EIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRL--------EKDRNLRRITRLVLVVVAVFVGCWTPVQ----VFVLAQGLGVQPSSETAVAILRF----CTALGYVNSCLNPILYAFLDENFKACFRKF---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196749 for 1924 contacts (-102.3/contact) +
2D Compatibility (PS) -26584 + (NN) -14695 + (LL) 3460
1D Compatibility (HY) -26400 + (ID) 4650
Total energy: -265618.0 ( -138.06 by residue)
QMean score : 0.335
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