Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILALPVWVYSKVIKFKDGVESCAFDLTSPDDVLW---YTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQR-VMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQPTLAFYVGYYLSIC--LSYASSSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF |
| 4EA3 Chain:B ((135-401)) | -------------------------------------------VCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA------EIECLVEIPTPQD-YWGPVFAICIFLFSFIVPVLVISVCYSL-------MIRRL----------EKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVA-ILRFCTALGYVNSCLNPILYAFLDENFKACFRKF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222712 for 1836 contacts (-121.3/contact) +
2D Compatibility (PS) -24474 + (NN) -2839 + (LL) 6144
1D Compatibility (HY) -29200 + (ID) 4350
Total energy: -277431.0 ( -151.11 by residue)
QMean score : 0.278
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