Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQLKGLIVLLYSVVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLAYAFEP---RGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLRLSAYAV---LAIWALSAVLALPAAVHTYHVELKPHDVRLCEEFWGSQERQRQLYAWGLLLVTYLLPLLVILLSYVRVSVKLRNRVVPGCVTQSQADWDRARRRRTFCLLVVIVVVFAVCWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSACYNPFIYAWLHDSFREELRKLLVAWPRKIAPHGQNMTVSVVI |
4EA3 Chain:B ((124-407)) | ----------------------------------------------------------LKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTL-----VLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPI-RALDVRTSSKAQAVNVAIWALASVVGVPVAIMG-SA-----EIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRL--------------EKDRNLRRITRLVLVVVAVFVG-CWTPVQVFVLAQGLGVQPSSETAVAILR-FCTALGYVNSCLNPILYAFLDENFKACFRKF--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263680 for 2016 contacts (-130.8/contact) +
2D Compatibility (PS) -26793 + (NN) -8962 + (LL) 6424
1D Compatibility (HY) -32800 + (ID) 4900
Total energy: -330711.0 ( -164.04 by residue)
QMean score : 0.343
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