Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLEDLVATGTIGTLLSAMGVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTKEWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQ-RPKGYRKLLALGTWLLALLLTLPVMLAMRLVR-RGPKSLCL-----PAWGPRAHRAYLTLLFATSIAGPGLLIGLLYARLARAYRRSQRAS-FKRARRPGARALRLVLGIVLLFWACFLPFWL----WQLLAQYHQAPLAPRTARIVNYLTTC--LTYGNSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
| 4RWD Chain:B ((125-405)) | -----------------------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVV--PILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQL------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212602 for 2005 contacts (-106.0/contact) +
2D Compatibility (PS) -27240 + (NN) -5911 + (LL) 1868
1D Compatibility (HY) -30000 + (ID) 4550
Total energy: -278435.0 ( -138.87 by residue)
QMean score : 0.381
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