Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL
5D1J Chain:A ((1-298))MENFQKVEKIGE--YGVVYKARNKLTGEVVALKKIR--------------EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF-----------------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL


General information:
TITO was launched using:
RESULT:

Template: 5D1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -170222 for 2037 contacts (-83.6/contact) +
2D Compatibility (PS) -28322 + (NN) -11526 + (LL) 1876
1D Compatibility (HY) -42800 + (ID) 13250
Total energy: -264244.0 ( -129.72 by residue)
QMean score : 0.775

(partial model without unconserved sides chains):
PDB file : Tito_5D1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D1J-query.scw
PDB file : Tito_Scwrl_5D1J.pdb: