Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLRARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEE------LKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQVYERLEKLQAVVAGVPGHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS |
| 4U9A Chain:B ((20-310)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAA--------LKQQFDQEIKVMAKCQHENLVELLGFSS---DLCLVYVYMPNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRNIKSANILLDEAFTAKISDF----------------VMTSR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH----------------------REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE-----AMYSVASQCLHEKKNKRPDIKKVQQLLQEMT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158278 for 2063 contacts (-76.7/contact) +
2D Compatibility (PS) -27336 + (NN) -9027 + (LL) 18696
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -203145.0 ( -98.47 by residue)
QMean score : 0.377
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