Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEK-----KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD---VAKRMHACTASS |
4B9D Chain:B ((12-285)) | ------------------------DLGTENLYFQSMEKYVRLQKIG-----KAILVKSTEDGRQYVIKEINI-SRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN--AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--NLVLKIISGSFPPV-SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155744 for 1988 contacts (-78.3/contact) +
2D Compatibility (PS) -28015 + (NN) -14356 + (LL) 1488
1D Compatibility (HY) -25200 + (ID) 5150
Total energy: -226977.0 ( -114.17 by residue)
QMean score : 0.457
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