Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGQVSSALSPCISYARGN----GAN-----PSAACCSGVRSLASSARSTADKQVACKCIKSAAAGL----------------N--------AGKAAGIPTKCGVSVPYAISSSVDCSKIR
1B1U Chain:A ((15-109))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33320 for 403 contacts (-82.7/contact) +
2D Compatibility (PS) -6097 + (NN) 1656 + (LL) 1752
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -39709.0 ( -98.53 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: