Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGQVDSKLAPCVSYVTGKAPSISKECCSGVQGLNGLARSSPDRKIACRCLKSLATSI------KS-----INMDKVSGVPGKCGVSVPFPISMSTNCNNVN
2DS2 Chain:B ((20-64))
---------------------------------------------PCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI-------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10714 for 157 contacts (-68.2/contact) +
2D Compatibility (PS) -3648 + (NN) -3088 + (LL) 1804
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -17946.0 ( -114.31 by residue)
QMean score : 0.111
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: