Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACQASQLAVC-----------ASAILSGAKPSGECCGNLRAQQGCFC---------QYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
2KSS Chain:A ((21-106))
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLI-QVLVEGLGEDLFFPEELELAPE
General information:
TITO was launched using:
RESULT:
Template:
2KSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23800 for 365 contacts (-65.2/contact) +
2D Compatibility (PS) -7059 + (NN) -2897 + (LL) -172
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -39828.0 ( -109.12 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_2KSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSS-query.scw
PDB file :
Tito_Scwrl_2KSS.pdb
: