Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QCNAGSLAVCTSPIISGTPPSKTCCNNLKSQRGCFCKFARNPAYSSYINSRNAGKTLTSCGIAVPKC--------------------------------------------- |
| 3NNF Chain:A ((25-342)) | MNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPNHKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHLKNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKP--GLHKLRRAFVIRLVDYDTRVD----EERLGLFSKYSQLHSRYYKTLPRYNKDSVLVMVSRAVQKGLKSPYLRDIPHVQQTLAARMAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2596 for 202 contacts (-12.9/contact) +
2D Compatibility (PS) -6470 + (NN) -1843 + (LL) 300
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -13709.0 ( -67.87 by residue)
QMean score : 0.290
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