Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCDAGKLIVCAAAI--IGGAEPSASCCTNLKAQ-----RGCLCKYASNPAYSGYINSPTT-RKTLASCGIPIPTCPQ
1HYP Chain:A ((10-73))
------DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32245 for 333 contacts (-96.8/contact) +
2D Compatibility (PS) -5410 + (NN) 982 + (LL) 92
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -41681.0 ( -125.17 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: