Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCDASALRPCVGAIMLGGAVTPGCCARLRAQRACLCQYARD-PSYRGYVNSPRAQSVVAACGLPGPKC---------------------------------------------------------------------------------------------------------------------------------------------- |
4EPQ Chain:A ((34-472)) | DYQFPLPQKNSELWIIQKKTLQDLSSGKQKLDSFQSLESILEILRDSKNQNDEKYFNLKAVFEQLDKEEQTYFLEQFIPKICQLVLKIKKKQLKNQIPKESKIYEAAFSREEISYYVSCMFLCILKDQDRKIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFANCDIGGGILGNGLVQEEIRFCVCPEMLVSLLVFD--QSMEANEVIIMKGIKQYSDYQGYSNSFRFVK------MGNSKIQKQKRTNPQTILAIDALCFNSSDNQFSEVNVSRELNKSYMGFKQEDQLKTISTGKWGCGAFLGVFDLKFAIQWIASSRSNKKMIICTFQDEQTTKQIQQVFDLYKQKNASIFLKLVMDYPNSKYMEDYTLLEYLIELGKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11845 for 265 contacts (-44.7/contact) +
2D Compatibility (PS) -5875 + (NN) 3313 + (LL) 668
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -19239.0 ( -72.60 by residue)
QMean score : 0.025
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