Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QCNAGQLAICAGAIIGGSTPSASCCSNLRAQRGCF-CQYARNPAYASYINSANARK--------TLTSCGIAIPRC-
2JMB Chain:A ((1-79))
MQHPYVGIWVTADGRIRQELLPNGRYDEARGNRKSAYQGRYEVRGAHINYWDDTGFTADGDFVSANELHHGGMTFYREK
General information:
TITO was launched using:
RESULT:
Template:
2JMB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29429 for 397 contacts (-74.1/contact) +
2D Compatibility (PS) -7085 + (NN) -1508 + (LL) 0
1D Compatibility (HY) 400 + (ID) 500
Total energy: -38122.0 ( -96.03 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_2JMB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JMB-query.scw
PDB file :
Tito_Scwrl_2JMB.pdb
: