Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSICDMDINDMQKCRPAITGNNPPPPVNDCCVVVRKANFECLCRFKF-Y-------LPILR-----IDPSKVVALVAKCGVTTVPRSCQV
2DS2 Chain:B ((7-68))
--------------------------LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI-GACP-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29625 for 263 contacts (-112.6/contact) +
2D Compatibility (PS) -4524 + (NN) 1704 + (LL) 512
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -33583.0 ( -127.69 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: