Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCTVDLK--GLIRECKQYVMFPAS---PKI------TPSSACCSVVQKVNSPCLCSKVTKEIEKVV-------CMDKVVYVADYYKNPLKPGSDCGSYHVPSQRR
1S6D Chain:A ((10-97))
-GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-----------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31235 for 474 contacts (-65.9/contact) +
2D Compatibility (PS) -7046 + (NN) -1485 + (LL) 264
1D Compatibility (HY) -5200 + (ID) 450
Total energy: -45152.0 ( -95.26 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: