Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLRKGCYDLGI--TVLMGCPDSIDKK----LPAPPT-----PSEGCCTLVRTIGMKCVCEIVNKKIEDTI-------DMQKLVNVAAACGRPLAPGSQCGSYRVPGA
1S6D Chain:A ((9-97))
---SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45046 for 470 contacts (-95.8/contact) +
2D Compatibility (PS) -7148 + (NN) -1504 + (LL) 372
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -58076.0 ( -123.57 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: