Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VPGQGTCQGDIEGLMKECAVYVQR----PGPKVN---PSEACCRVVKRSDIPCACGRITASVQQMI-------------D-------M--DKVVHV--TAFCGKPLAHGTKCGSYVVP
1BEA Chain:A ((18-112))
---------------PSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGV--------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34310 for 370 contacts (-92.7/contact) +
2D Compatibility (PS) -6679 + (NN) -3382 + (LL) 584
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -48137.0 ( -130.10 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: