Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAPSSAQGTTTPADASGAVPSCASKLVTCAGYLNT-TDTPPESCCDPLKEAATTQ-AACMCAILMNKAALQAFGVAPEQGVLL-AKRCGVTNDASTCAK
1HYP Chain:A ((10-72))
------------------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYP------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36778 for 337 contacts (-109.1/contact) +
2D Compatibility (PS) -6092 + (NN) -1077 + (LL) 1200
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -47747.0 ( -141.68 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: