Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATSSSSSSQLHCGTVTSLLSGCAAFVRGHGGGAQLPSPGTPCCDGVAGLYAVAADSADNWRAVCRCMARLVRRH-SSNASAIALLPGVCGVVSPWTFAAGNTNSNRPYCRSLP
1SIY Chain:A ((1-91))
---------MTCGQVQGNLAQCIGFLQKGG------VVPPSCCTGVKNILNSSRTTAD-RRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSIN------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87066 for 694 contacts (-125.5/contact) +
2D Compatibility (PS) -9332 + (NN) -1786 + (LL) 280
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -104004.0 ( -149.86 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: